Cryo-EM Part B: 3-D Reconstruction

1. Fundamentals of three-dimensional reconstruction from projections<br>Pawel A. Penczek<br>2. Image Restoration in Cryo-electron Microscopy<br>Pawel A. Penczek<br>3. Resolution measures in molecular electron microscopy<br>Pawel A. Penczek<br>4. 3D reconstruction from 2D crystal image and diffraction data<br>Andreas Schenk, Daniel Castaño-Díez, Bryant Gipson, Marcel Arheit, Xiangyan Zeng, and Henning Stahlberg<br>5. Fourier-Bessel Reconstruction of Helical Assemblies<br>David L Stokes, Ruben Diaz & William, J. Rice<br>6. Reconstruction of Helical Filaments and Tubes<br>Edward H Egelman<br>7. Three-Dimensional Asymmetric Reconstruction of Tailed Bacteriophage<br>Jinghua Tang, Robert S. Sinkovits, and Timothy S. Baker<br>8. Single Particle Analysis at High Resolution<br>Yao Cong and Steven J. Ludtke<br>9. The Orthogonal Tilt Reconstruction method<br>Andres Leschziner<br>10. An introduction to maximum-likelihood methods in cryo-EM<br>Fred J. Sigworth, Peter C. Doerschuk, Jose-Maria Carazo, and Sjors H.W. Scheres<br>11. Classification of structural heterogeneity by maximum-likelihood methods<br>Sjors H.W. Scheres<br>12. Methods for three-dimensional reconstruction of heterogeneous assemblies<br>Elena V Orlova, Helen R. Saibil<br>13. Alignment of cryo-electron tomography datasets<br>Fernando Amat, Daniel Casta˜no-Diez, Albert Lawrence, Farshid Moussavi, Hanspeter Winkler, & Mark Horowitz<br>14. Correcting for the Ewald sphere in high resolution single particle reconstructions<br>Grant J Jensen, Peter A. Leong, Xuekui Yu, & Z. Hong Zhou<br>15. Software Tools For Molecular Microscopy: An Open-Text Wikibook<br>Bridget Carragher, Neil R. Voss, Clinton S. Potter, & Ross Smith